PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73237.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 285aa    MW: 30824.8 Da    PI: 7.947
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.75.9e-17200234135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  OWM73237.1 200 CTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRL 234
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MECGGLTAAT TTTLDDLFSQ NTEVDVGTEW LSIFVEDCLS GQGSCLPPPM ASPRPTTPSP  60
ASDPTRPSNM RKPQTALHSF PVAGKARSKR KRIAAAKSKA PSATPWSQSS CPQTLSHFPS  120
SDPLLLDQAY WLADSELIAP KKPAVEATEG EEEAGNERPR RKNKYTAPAP AQQPGEDEEE  180
EEEEGKGVKG GMGMSQPRRC THCLSQRTPQ WRAGPLGPKT LCNACGVRYK SGRLLPEYRP  240
AKSPTFVSYL HSNSHKKVME MRNGMGMVSV SSIPAHEMEK GCGAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162RPRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.18e-35GATA family protein