PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72045.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 607aa MW: 68217.6 Da PI: 5.9756

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	3.9e-12	410	456	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++h +ErrRR+ri + f +L++++P+ + K +K+++L ++eY+k+L OWM72045.1 410 QNHVLAERRRRERIHEQFGTLKSIVPSvN------KFDKVSVLDDTIEYLKQL 456 68999********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MESGTANRGN GVPENLKQQL AIAVRSIQWS YGIFWSISPS QPGMLEWGDG YYNGDIKTRK 60 TVQAVEFNAD ELGLQRSEQL RELYESLSAG ESSGQIRRPS AALSPEDLTD TEWYYLVCMS 120 FHFDIGQGLP GRTLATGQPI WLCDAPYADS KTFSRSLLAK TVVCFPFFGG VVELGVTDMV 180 PENPAPIQHV KASLLETPHW KYSMKFHHDN FETRMIPIAG ELEMVSPTSS SNAFEAHQLP 240 DESQMVEGIN GAASQVHSWQ FMDDDFSNCL QHSVNSSDCV SQSLIDPGNV IEYPLQEDER 300 KGGNHDRLGV DVRDDDFHYQ SILSSLLKTS KELIFGPSLP KGKRESSFRT WKKGGSANSG 360 KLSSGTNQRL LKSILFEVPH MHDEGLREYQ MESSCMKNGV CRPEADEIGQ NHVLAERRRR 420 ERIHEQFGTL KSIVPSVNKF DKVSVLDDTI EYLKQLVRRV EELECTVSEE NHRRKLPQDT 480 SERTCDNYGE NKLGIGKRHS VSKRPSVSKR KAQEMDETGT EINCTENLIV TVEDKEVVIE 540 MKCKWREGLL LEVINAASNL RLDSHSVQTS TADGILSLAM RSKFVGSASP SAQTIRQALQ 600 RFAWRQR

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MESGTANRGN GVPENLKQQL AIAVRSIQWS YGIFWSISPS QPGMLEWGDG YYNGDIKTRK  60
TVQAVEFNAD ELGLQRSEQL RELYESLSAG ESSGQIRRPS AALSPEDLTD TEWYYLVCMS  120
FHFDIGQGLP GRTLATGQPI WLCDAPYADS KTFSRSLLAK TVVCFPFFGG VVELGVTDMV  180
PENPAPIQHV KASLLETPHW KYSMKFHHDN FETRMIPIAG ELEMVSPTSS SNAFEAHQLP  240
DESQMVEGIN GAASQVHSWQ FMDDDFSNCL QHSVNSSDCV SQSLIDPGNV IEYPLQEDER  300
KGGNHDRLGV DVRDDDFHYQ SILSSLLKTS KELIFGPSLP KGKRESSFRT WKKGGSANSG  360
KLSSGTNQRL LKSILFEVPH MHDEGLREYQ MESSCMKNGV CRPEADEIGQ NHVLAERRRR  420
ERIHEQFGTL KSIVPSVNKF DKVSVLDDTI EYLKQLVRRV EELECTVSEE NHRRKLPQDT  480
SERTCDNYGE NKLGIGKRHS VSKRPSVSKR KAQEMDETGT EINCTENLIV TVEDKEVVIE  540
MKCKWREGLL LEVINAASNL RLDSHSVQTS TADGILSLAM RSKFVGSASP SAQTIRQALQ  600
RFAWRQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	416	421	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein