PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71982.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25868.7 Da PI: 5.9768 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.1 | 2.5e-14 | 41 | 89 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ g+Wv+e+r + r +lg++ +e+Aa+a++ a ++l+g OWM71982.1 41 PVYRGVRRRG-GGKWVCELRNG-----KSRLWLGTYPAPEMAARAHDVAVLALRG 89 68*****999.9******9994.....6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MDRSTEIGLG SKAGSEETYL LASTQPKKRA GRKKFKETRH PVYRGVRRRG GGKWVCELRN 60 GKSRLWLGTY PAPEMAARAH DVAVLALRGR SACLNFADSA WRLPIPSSAS DADIRAAAIE 120 AAEMFRQARQ EGASSSSSGL KHEEAVSDAE SSSGSADLRA EEDRHTMANE RSPENGGAGC 180 RYYLDEEAIF SLPGLLVDMA EGLMVAPPPI VLEESSNHWD GDSLYDSDVS IWNHSTW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 4e-51 | ERF family protein |