PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 29042.1 Da PI: 5.746 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.7 | 6.4e-11 | 86 | 138 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++ h +Er+RR+++ s + Lr++lP ++K s ++ +A+ YIk+Lq OWM71950.1 86 RKTVHRDVERQRRQEMASLYGSLRSHLPVE--ILKGKRSISDHIYQAIGYIKNLQ 138 7899*************************6..49********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDYVTSTNIS LDQMDELFQF SSSLPYQEQP QVADELEEIL FAPSPPDWNI PAVEDILGGP 60 PSVEPLAAPL GGTSAEPKRP ESSKKRKTVH RDVERQRRQE MASLYGSLRS HLPVEILKGK 120 RSISDHIYQA IGYIKNLQRK IQVLSDKRDE MKRVSDSKKI DDPKTNKEES PRPRGHQDVV 180 TIEPCIGGIE ITISTDLKQG VALSKVLGFL IREGMTLISC ASTVVNERLL HSIKSEVIGD 240 DGSEIENLSA LREKLMNLSR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 98 | KRKTVHRDVERQRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 7e-36 | bHLH family protein |