PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71594.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

E2F/DP

Protein Properties

Length: 377aa MW: 42232.4 Da PI: 7.8239

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	70.5	2e-22	18	83	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL++l+++fl+l++k + + l+++a +L v +rRRiYD++N+Le+++++++k+kn++ wkg OWM71594.1 18 RKDKSLGVLSSNFLRLYNKDGVDSIGLDDAAIRL---GV--ERRRIYDVVNILESIGVVARKAKNQYAWKG 83 79***************999********.....****************************98 PP
2	E2F_TDP	73.5	2.3e-23	143	223	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL +ltq+f+kl+ +s ++ +tl+++a +L+ + +++k RR+YDi+NV++++n+iek ++k+++rw g OWM71594.1 143 RKEKSLAILTQNFVKLFLCSGAELITLDSAAMALLGDnsnstAMRTKIRRLYDIANVFSSMNMIEKthhpeTRKPAFRWLG 223 79**************************************9********************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MSVLGGGDCE SRQPFYCRKD KSLGVLSSNF LRLYNKDGVD SIGLDDAAIR LGVERRRIYD 60 VVNILESIGV VARKAKNQYA WKGFGVIPEA LEELKEVGLK ENFTMSSCFN STKVSNDCET 120 VGSSDLKLEM QDVSSGSSKN DNRKEKSLAI LTQNFVKLFL CSGAELITLD SAAMALLGDN 180 SNSTAMRTKI RRLYDIANVF SSMNMIEKTH HPETRKPAFR WLGWRGTPVN GFIYAAGSDK 240 SESRKRMFGL DLTNYESKRS KVDSSISWKS NGMVKYPVAV KQEDSENSCD NKSEVEQQPS 300 HEVRGYVFGP FAPEPVSQSA ATERNSARRT QDWETLASAH RPQYQNQALS DLFAHYMEAW 360 KSWYTEVAGN NHVQEVS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MSVLGGGDCE SRQPFYCRKD KSLGVLSSNF LRLYNKDGVD SIGLDDAAIR LGVERRRIYD  60
VVNILESIGV VARKAKNQYA WKGFGVIPEA LEELKEVGLK ENFTMSSCFN STKVSNDCET  120
VGSSDLKLEM QDVSSGSSKN DNRKEKSLAI LTQNFVKLFL CSGAELITLD SAAMALLGDN  180
SNSTAMRTKI RRLYDIANVF SSMNMIEKTH HPETRKPAFR WLGWRGTPVN GFIYAAGSDK  240
SESRKRMFGL DLTNYESKRS KVDSSISWKS NGMVKYPVAV KQEDSENSCD NKSEVEQQPS  300
HEVRGYVFGP FAPEPVSQSA ATERNSARRT QDWETLASAH RPQYQNQALS DLFAHYMEAW  360
KSWYTEVAGN NHVQEVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01330.1	1e-122	E2F/DP family protein