PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70791.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 262aa    MW: 27527.7 Da    PI: 7.9036
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.00015108130123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k Fs+   L  H  +H
  OWM70791.1 108 YKCSVCDKAFSSYQALGGHKASH 130
                 9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MALEALNSPT ATPPPFQFMD DAAASNIHFM EPFTKRKRSR RPHQPPTEEE YLALCLIMLA  60
RGGRRAGETQ TPPSDSSSPA PPQPQPQPQQ LALVNRDASS NGTSSLIYKC SVCDKAFSSY  120
QALGGHKASH RKLAGAGADE PSTSTATATT TAANAAASGS GRVHECSICH KTFPTGQALG  180
GHKRCHYEGG AANSGATATG SVSVGSTHTA GHSQRDFDLN LPALPEFSPK FLVSGDDEVE  240
SPHPMKKARL SIPLKLEVPS DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.19e-57C2H2 family protein