PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM70652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 256aa MW: 29106.6 Da PI: 8.6794 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.1 | 6.4e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +lv++++ + g W++ a+ g++Rt+k+c++rw++yl OWM70652.1 15 KGPWTMEEDSILVNYIANHSEGAWNSLAKSAGLKRTGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.6 | 2.9e-18 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ +lG++ W++Ia++++ gRt++++k++w++ OWM70652.1 68 RGNITPEEQLLIIELHSKLGNR-WSKIAKHLP-GRTDNEIKNYWRT 111 7999******************.*********.***********96 PP | |||||||
3 | Myb_DNA-binding | 30.9 | 6.4e-10 | 151 | 173 | 22 | 46 |
T-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46 g W++Ia++++ gRt++++k++w++ OWM70652.1 151 G-WSKIAKYLP-GRTDNEIKNHWRT 173 4.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEEKGCSSEG PEVRKGPWTM EEDSILVNYI ANHSEGAWNS LAKSAGLKRT GKSCRLRWLN 60 YLRPDVRRGN ITPEEQLLII ELHSKLGNRW SKIAKHLPGR TDNEIKNYWR TKIHKHINKH 120 RDTSVLYNCD VSKQYKHQGD TGWMDIGTTT GWSKIAKYLP GRTDNEIKNH WRTKIYKHIN 180 KHGDSSVLYN RDTSEQYEHQ GDTGWMVIET TTGYPTGTCF SQPSTCQGNT EVSGASSLAE 240 PGTSLVGWSL EDLLSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G40350.1 | 2e-68 | MYB family protein |