PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM70452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 313aa MW: 35396.5 Da PI: 6.2339 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 2.8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l +k++G g+W++ +++ g+ R++k+c++rw +yl OWM70452.1 14 KGPWTAEEDEILRSFIKKHGHGNWRALPKHAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.1 | 1.5e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w++ OWM70452.1 67 RGNFTKEEEETIIKLHASLGNK-WSLIASHLP-GRTDNEVKNMWHT 110 89********************.*********.*********9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MVRAPCCWRK GLKKGPWTAE EDEILRSFIK KHGHGNWRAL PKHAGLLRCG KSCRLRWTNY 60 LRPDVKRGNF TKEEEETIIK LHASLGNKWS LIASHLPGRT DNEVKNMWHT RLKKRVLNLK 120 EHRPDGSNIS IPSEEQSQEP SNWGSPPPPG FEVGSTNTVQ VHDYPIFSPQ HALEFNVEST 180 STVQVPDYSI FSPQHSYSGI SRVLTGGAND YKAETVGTKI DLIDSLGPFP ELDGSFWSDS 240 VSADYSMVQW EFAFYGGDIL QLPGEVDSFT KANNDQMGIW RDDDPNHLVL NDGLDFWYDL 300 FVHSEGFGSS SNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-68 | MYB family protein |