PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70196.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 337aa    MW: 36137.5 Da    PI: 7.2236
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.22e-17252285134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  OWM70196.1 252 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 285
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MIGQKLMDEA ADCGSFFDHI DDLLDFPVED VEAGLPLANH DSFPSIWSAQ TESLPCSDSV  60
FTNNSSSADL SAELSVPYED IVQLEWLSTF VEDSFSGESL TINKLESSTT ESKEPTSHHQ  120
FHTSSPVSVL DSSSSCSGSG GKPSPWSPES ATPKGSRCGR ARSKRPRPAT FSPRPAIQIL  180
LPGGALDSSA ASPKASFESE NAAESQPVKI KIPKPAKNPE HKKKKKIKPA AAPLGPTNGN  240
QNPPSTQPVR KCLHCEITKT PQWRAGPMGP KTLCNACGVR YKSGRLFPEY RPAASPTFVP  300
SVHSNSHKKV LEMRSKGEGE PGVTLIPNTN VAIDYSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164168KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.28e-41GATA family protein