PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69867.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 305aa    MW: 32776.6 Da    PI: 7.1175
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.87e-26135195259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg++WrKYGqK++  se+pr+YYrCt++   +Cp+k+ v+r + dp+++e+tY ++H+++
  OWM69867.1 135 DDGHTWRKYGQKKILHSEYPRGYYRCTHRklyDCPAKRMVQRLDADPSTFEVTYIDHHTCH 195
                 8***************************99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MDQPDDTIAS TCEAIARVFH GARKRLIVAS SSSGEGKVNC AQIQTSGCLE TRSNNMVGSA  60
ETEIAGRINP GGSATILHRV EGGGNVRTMP VAVSPDSGRG SASSSHGTSR RRDRPHRSSI  120
RVPVPEIGNP DLPPDDGHTW RKYGQKKILH SEYPRGYYRC THRKLYDCPA KRMVQRLDAD  180
PSTFEVTYID HHTCHLSSTA PSLVPVPPPS SLPPADHMDD VDHLMMTTVT PLSMGLRTQG  240
GIACSGGGIQ GTASGDREAE YAVSQMADEM FNSRCTGSTS SNIMDLIFLA EAEEDRRAAS  300
VGKSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.19e-34WRKY family protein