PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69581.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 203aa    MW: 21699.3 Da    PI: 8.6933
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69581.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000154567123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C + F ++  L  H++ H
  OWM69581.1 45 FSCNYCQRKFYSSQALGGHQNAH 67
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MEPGGSKKLE ADLVLDLSLC SNDSPLSHDD CSNDNSGNLS EPRVFSCNYC QRKFYSSQAL  60
GGHQNAHKRE RTLAKRGQRF SPLGYLSRVT SMASLPLHGS TGCGRSSLPL GIQLHSMIHK  120
QPSSYAASSG SQCLLGGRST MGCHLGNQQL SSGSPGNIGA IQKSSDPAGL EGFGELWWSG  180
SVNHSHVKSK QNDLQKLDLS LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.14e-34C2H2 family protein