PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69209.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 415aa MW: 45802.8 Da PI: 5.722

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.9	1.1e-10	324	395	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C........................TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.as.....................kapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L++l+P+ + + + + ae+L +Av+YIk+Lq OWM69209.1 324 SIAERVRRTKISERIRKLQDLVPNmDKvdiefskllmfiviyeipiieCLSLQQTNTAEMLDLAVDYIKELQ 395 689*******************988****************96677789**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MESDPFQNFQ SQAQNQQQTN PGLTRYRSAP SSYFTNLLER EFYDEFLNRP TSPETERILS 60 GLMSGDFRPR DEAGSQQPEV PGPGKSKAEI FPRQPKLEQE PQQGSYSASA SSSQNYYQSS 120 SHHRALPNQS SSHHRALPNQ SLDYRAVGSI GSGSNSSGLL RQSSSPAGLF LNNSNSIEGY 180 GTMRGMGSFG TSSRETSYSP APRFSDAVNY LSAGQPLSSG KMSPIAEMES KGLGKSTNSP 240 EGGGFDEGDG TNYDASFPLG SWDDSCLNAS EAEEGQGRRD PPTLLAHHSS LPKSSLEIER 300 LLQFQDSVPC KIRAKRGCAT HPRSIAERVR RTKISERIRK LQDLVPNMDK VDIEFSKLLM 360 FIVIYEIPII ECLSLQQTNT AEMLDLAVDY IKELQEQVEA LLDSKLKCVC SNRQM

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MESDPFQNFQ SQAQNQQQTN PGLTRYRSAP SSYFTNLLER EFYDEFLNRP TSPETERILS  60
GLMSGDFRPR DEAGSQQPEV PGPGKSKAEI FPRQPKLEQE PQQGSYSASA SSSQNYYQSS  120
SHHRALPNQS SSHHRALPNQ SLDYRAVGSI GSGSNSSGLL RQSSSPAGLF LNNSNSIEGY  180
GTMRGMGSFG TSSRETSYSP APRFSDAVNY LSAGQPLSSG KMSPIAEMES KGLGKSTNSP  240
EGGGFDEGDG TNYDASFPLG SWDDSCLNAS EAEEGQGRRD PPTLLAHHSS LPKSSLEIER  300
LLQFQDSVPC KIRAKRGCAT HPRSIAERVR RTKISERIRK LQDLVPNMDK VDIEFSKLLM  360
FIVIYEIPII ECLSLQQTNT AEMLDLAVDY IKELQEQVEA LLDSKLKCVC SNRQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	5e-50	bHLH family protein