PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69198.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 409aa MW: 46482.9 Da PI: 6.4559

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69	9.3e-22	108	205	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt++ v++Li+++ ++++ + +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++ t++++++ +++d++ OWM69198.1 108 KWTDDVVRLLIAVVACVGDDGALDGveglkrkpgmifQKKGKWKTVSKIMIKKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtTCRVVENPALLDSM 205 7************8888887554445666778888******************************************77****9999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MNNSWGLGGG FMSGPNGGSL DLEPPMHRHH HTQLAHPSSS NQHQINLMTV ALENDHQFIR 60 FHKGKAPAAA LDNSNASDEE GPNLEDGNGD NPHGGKGKKG NAPWQRMKWT DDVVRLLIAV 120 VACVGDDGAL DGVEGLKRKP GMIFQKKGKW KTVSKIMIKK GCHVSPQQCE DKFNDLNKRY 180 KRLNDILGRG TTCRVVENPA LLDSMPQLSA KAKDDVRKIL SSKHLFYKEM CAYHNGQRIP 240 NCQDLDLQGY SLHLEKESNG SGDEGEGNDD DDSDDDDDSE NEDEDNADGN MDRMESYGEG 300 GSGGRDSFEF QMAGMFRDPS KSAAEQKEWI KWQKLQLQEK KVQIQAQSFE LERQRFKWQR 360 YCSKKQRELE RMRLENERMN LESEWRELQL KQKELEMGPK RSNLIPRRI

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MNNSWGLGGG FMSGPNGGSL DLEPPMHRHH HTQLAHPSSS NQHQINLMTV ALENDHQFIR  60
FHKGKAPAAA LDNSNASDEE GPNLEDGNGD NPHGGKGKKG NAPWQRMKWT DDVVRLLIAV  120
VACVGDDGAL DGVEGLKRKP GMIFQKKGKW KTVSKIMIKK GCHVSPQQCE DKFNDLNKRY  180
KRLNDILGRG TTCRVVENPA LLDSMPQLSA KAKDDVRKIL SSKHLFYKEM CAYHNGQRIP  240
NCQDLDLQGY SLHLEKESNG SGDEGEGNDD DDSDDDDDSE NEDEDNADGN MDRMESYGEG  300
GSGGRDSFEF QMAGMFRDPS KSAAEQKEWI KWQKLQLQEK KVQIQAQSFE LERQRFKWQR  360
YCSKKQRELE RMRLENERMN LESEWRELQL KQKELEMGPK RSNLIPRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	6e-67	Trihelix family protein