PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68903.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 294aa    MW: 32242.3 Da    PI: 8.806
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68903.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.5e-19202235134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs+C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  OWM68903.1 202 CSHCEVTKTPQWREGPMGPKTLCNACGVRYRSGR 235
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MVGPLLLDDF NGNPDEFYDN VIKHIDFPLE DVVGNVLDDD WDERFQLLEL PSSDILAGLP  60
SGLGGKLCDD DSGPLSTTPE GKPKLKDSSQ VNGEATSDRH ILFGGIKDSS LFQTTSGSVS  120
VLESGSSWSG YNSVHFGVRF FIPVKRARSK RLRPPTLNPR LTSIPFISFS EKRKGKKKNL  180
SVLSGGNNNN EPTLLSNGTR KCSHCEVTKT PQWREGPMGP KTLCNACGVR YRSGRLFPEY  240
RPAASPTFIA SLHSNSHKKV VEMRKKVSRE GAVSNDSMRP SSRQLENSDG CLSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-54GATA family protein