PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68859.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family AP2
Protein Properties Length: 298aa    MW: 32772.5 Da    PI: 5.6706
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2232e-071241532855
         AP2  28 r..krfslgkfgtaeeAakaaiaarkkleg 55 
                    ++++lg f+t  eAa+a+++a+ k++g
  OWM68859.1 124 AaaRYIYLGVFDTDIEAARAYDEAAIKYNG 153
                 2359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MLDLNLNLNS ELPSAESSQE NNSVAVLPEA SLTQLDESVE TSNSSIVNAF WXXXXXXXXX  60
XXXTRSLPVP TCTPSISTSS RSEGWENAAV RKLRQRSSSF RREQWEKTAK IARGGSGGFD  120
TAHAAARYIY LGVFDTDIEA ARAYDEAAIK YNGREAVTNF VRSSYYGEII TEANHQGGDH  180
NLDLNLGISP PSLGKCLNEV DTSLQCHTEI SSMHDGRDLR VENPVAAAWN SPAILPRMGR  240
AKEQRIEFGR LCFPGWASHC QGKVGMAVTV FGVDRISTFN TGIWEKGGSE TYRASFIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.34e-19AP2 family protein