PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68798.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 658aa MW: 73252.7 Da PI: 9.8339

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.2e-08	563	612	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + k+Rt ++k++w ++ OWM68798.1 563 RRPFSVAEVEALVQAVEKLGTGRWRDVKMQAFddaKHRTYVDLKDKWKTL 612 6789999*****************7555558************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MALNVHVSPS ESYKITGGPP GRQRTGRYEH LALPAIARQL ARGYRMVSNR RLEYGFSGYQ 60 VPATPRAPRS ARRRCSIQKK VDDRKMHAFN LLAAVAGELL LEKAVCPSSS TSSTQKDQCP 120 INEAGRDKEW QDRCNPLELK PSVHENRGKS FVVSELFSPD KDKNNGSEFK GKDDSVSSAI 180 EVGLHEDSGS YSNQEDEVRV HNKEAQLNNG NFACSSDIDL CSLGSPIKCI RDNRKVFSRD 240 DDDNLPGCTH PGTMKKKPFT SVPRIGDRRI RKILASKYWK APKLKVEHCS RSDGNLKVAY 300 WNRKGCYRHQ RSQRNYPFKK RFFNINCSKN SDGRDRSLAP EKDFNGDVSE DGPSPFKEGQ 360 HSLYRRRDSH VKLRIKSLRV PELYIEVAET ATVGSLKRTV MEALSAILRG GVRVGVLLRG 420 KKVRDDSKTL LQSGISHDNR PDALGFTLEP SSSLAPAESP APGLSPASLP CDASQPYAGY 480 ATDSVAHQGP SLPLIECQGA NLVKPIKNDN HNAAAPIDIP IDECSVDSRA LVAVPTTTSR 540 EALAVVPVQQ KLGKSEIAQR RVRRPFSVAE VEALVQAVEK LGTGRWRDVK MQAFDDAKHR 600 TYVDLKDKWK TLVHTARISP QQRRGEPVPQ ELLDRVLAAH AYWSYHQSEP QQQQLSDA

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MALNVHVSPS ESYKITGGPP GRQRTGRYEH LALPAIARQL ARGYRMVSNR RLEYGFSGYQ  60
VPATPRAPRS ARRRCSIQKK VDDRKMHAFN LLAAVAGELL LEKAVCPSSS TSSTQKDQCP  120
INEAGRDKEW QDRCNPLELK PSVHENRGKS FVVSELFSPD KDKNNGSEFK GKDDSVSSAI  180
EVGLHEDSGS YSNQEDEVRV HNKEAQLNNG NFACSSDIDL CSLGSPIKCI RDNRKVFSRD  240
DDDNLPGCTH PGTMKKKPFT SVPRIGDRRI RKILASKYWK APKLKVEHCS RSDGNLKVAY  300
WNRKGCYRHQ RSQRNYPFKK RFFNINCSKN SDGRDRSLAP EKDFNGDVSE DGPSPFKEGQ  360
HSLYRRRDSH VKLRIKSLRV PELYIEVAET ATVGSLKRTV MEALSAILRG GVRVGVLLRG  420
KKVRDDSKTL LQSGISHDNR PDALGFTLEP SSSLAPAESP APGLSPASLP CDASQPYAGY  480
ATDSVAHQGP SLPLIECQGA NLVKPIKNDN HNAAAPIDIP IDECSVDSRA LVAVPTTTSR  540
EALAVVPVQQ KLGKSEIAQR RVRRPFSVAE VEALVQAVEK LGTGRWRDVK MQAFDDAKHR  600
TYVDLKDKWK TLVHTARISP QQRRGEPVPQ ELLDRVLAAH AYWSYHQSEP QQQQLSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-87	MYB_related family protein