PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68687.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 298aa    MW: 33805.5 Da    PI: 4.7514
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.7e-20100149255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +grW+AeIrdp +   r+r++lg+++taeeAa  +++a+ +++g
  OWM68687.1 100 KYRGVRRRP-WGRWAAEIRDPLK---RTRVWLGTYDTAEEAAMVYDRAAIQIKG 149
                 8********.**********754...5**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDRPGKPLLP KYTEHRTVTH KTLKAPLSKE FPERVIRISF TDRDATDSSS DEDEVPRVKR  60
YVTEIRIGDP DHRAEKPRAA AGKKAEGART APQRWPDGRK YRGVRRRPWG RWAAEIRDPL  120
KRTRVWLGTY DTAEEAAMVY DRAAIQIKGP DALTNFMTPP ARVNPQIDVA AVSECESGKD  180
SHNLSSPTSV LRFQSGEEAD SKCEFGPYLD EASGLMEEGC LLDPLFLKDF FDDDQTPAPV  240
FYDDHSILTD SFLREEVDSY SISFPEEDFG SCKWDVDSFF QDPYAASSST NDQSQVYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46310.11e-47ERF family protein