PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67731.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 307aa    MW: 33928.2 Da    PI: 4.4286
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.000112562951054
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r RR++i++    L+e++P      ++  + + +L +A++Y+ksL
  OWM67731.1 256 RIRREKIRETVGLLQEMIPGG----KG-KDAVVVLDEAIDYLKSL 295
                 89*****************97....23.4679***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MYAFPKVPNS RIGHFNQPQG WFYCLPRFRQ AFTPGPNYSA LKEKLPIDCY GNSNLNAEKK  60
FLVFDQSGDQ TTVMVSSGPG TTFRCMTSWT LKQPVQPNMD VEGHGGKLDS YPNSGPTSGN  120
NLSGSNEETD VSSEMHEDTE ELNALLYSDD DDDESYYSEE DDEVTSTGHS PSTMTAHEGL  180
HRFDRADKEE VASSAWPKKR KLNENDVEAL DDTASSGDIN GQSNYLSNDD YAESSCADRE  240
SYGFQKMGLP SAESKRIRRE KIRETVGLLQ EMIPGGKGKD AVVVLDEAID YLKSLKVRAN  300
ALGLAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.16e-07bHLH family protein