PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67617.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 325aa    MW: 35660.9 Da    PI: 8.6299
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.7e-20140189356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa+a++ a+  l+ge
  OWM67617.1 140 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAARAYDTAAYLLRGE 189
                 8******9.**********955...5***********************99996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MTSNLPDSRS SSSSSSSSPN GSITCTGSNQ FSVSDPPTPT SISPSLDLPS LSLFWHDPAK  60
PNPSAQIQNF LSNNESPDHR IPTSMNPLCS IPLLGQLHAE QVKTDLGMTN SASNWLSTIR  120
TQPMKCTGRK SPNRMPGKLF RGVRQRHWGK WVAEIRLPRN RTRVWLGTFD TAEEAARAYD  180
TAAYLLRGEY AHLNFPDLKH ELKANSTTAA LLEAKMRTIL QGNQTTCNTN LSSYASSSAF  240
LHKKVPVLDQ SPKNPVPNLD STVNVLSQHS PAGNDSNDSK PAFESKFGSS YHHQTAGRES  300
EAVQLSRMPS LDMELIWEAI LVSET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.11e-40ERF family protein