PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM67516.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 172aa MW: 18616.2 Da PI: 6.3529 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.7 | 1e-16 | 14 | 63 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+Wv+eIr+p g + r +lg++ t+e+Aa a++ a +l++ OWM67516.1 14 KYSGVRCRK-WGKWVSEIRVP---G-TqERLWLGSYSTPEGAAMAHDIAYYCLRQ 63 8*****777.**********8...3.35************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MSSSEESPGA PHRKYSGVRC RKWGKWVSEI RVPGTQERLW LGSYSTPEGA AMAHDIAYYC 60 LRQPTSLDKL NFPSLLPPRL RGDLSPGSVQ KAASDAGMAI DAQFISQRVA EEGSRSGNYS 120 RNSSFGNSGD EGFRTSEERD HSHQYYSTGG GGGGGEGGEG HLSISVEDYN YS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 9e-46 | ERF family protein |