PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67090.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 404aa    MW: 43576.2 Da    PI: 6.6547
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-1778135155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpse..ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +g+WvAeIr+p +  +g ++  r +lg+f t  +Aa a+++a+++l+g
  OWM67090.1  78 CSYRGVRQRT-WGKWVAEIREPLDksRGqVKaNRLWLGTFETSHKAALAYDEAARALYG 135
                 67*****999.**********87778889666************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MSCNPSTNQS PGPVTSPALS GVRRLKKRQN GSDSIEDTLS RWKEHNESSP TSGRRVPPAK  60
GSRKGCMRGK GGPENSVCSY RGVRQRTWGK WVAEIREPLD KSRGQVKANR LWLGTFETSH  120
KAALAYDEAA RALYGPLARV NFPEWTASAS ASTLSKPSCS RERQEIDGCE VSSGGSRFEG  180
KEIVEPSPNG SFGTLSPVKI PDSDPSTVQG SLEVKGEPSS DRMELYGPMI NGNTAVKPVP  240
SSRDPGLELF CRCSGLKSYT FSQASGNLDD PGTCYVPSSA ASVELAGSMD STCSNSINSC  300
NNRVDGRAYH GAVAATIKME QQQLGRADSI GSSDQPFVRE AGAAGLWDQH SNYGLMWKSG  360
GCGMLGDQVG DDEEGTSYNF DFLRPDYDFG LVEEQGLLHS WFRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-31ERF family protein