PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66647.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 653aa MW: 70894.9 Da PI: 7.522

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	1e-32	290	347	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkve+s d++++ei+Y+g+Hnh+k OWM66647.1 290 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVEKSL-DGQITEIVYKGSHNHPK 347 8**************************************.*************85 PP
2	WRKY	106.4	1.4e-33	468	526	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ OWM66647.1 468 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 526 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MQGRPMEKHR LREKLQSGSL DTSANSHPPP NCTASFTFPA HGHGHHPFFM TTSSFSSLLT 60 SSSRDDIIDH HHHHHRVGGS NNNSSSSSSL SDRIAERTGS GVPKFKSIPP PSLPLSPPSV 120 SPSSYFAIPP GLSPAELLDS PVLLSASNNI MPSPTTGTIP AHAFNWSWQV APPAGSGGSR 180 PVNRAEDFDK CHPSFFDFTF QTGPNIAAAA VTQGQKQSWN LPESAKQDDD ALRKGLVKPE 240 FDSYTPEEIT ALQTGNNLNN MTISNGTHQS MHSTSNPYNQ QQQQPNRRSD DGYNWRKYGQ 300 KQVKGSENPR SYYKCTYPNC PTKKKVEKSL DGQITEIVYK GSHNHPKPQS TSRRSSSSSS 360 APPTHAVALV QAASSSGHPP ISDFLDHSLS AQMESGTPDN SSLSVGDEDF DQGSQKSKTA 420 GGDDLDEDEP DAKRWKKEGE SEGISGAGSR TVREPRVVVQ TTSDIDILDD GYRWRKYGQK 480 VVKGNPNPRS YYKCTHPGCP VRKHVERASH DLRAVITTYE GKHNHDVPAA RGSSSHTVNR 540 TSTEGTSNNS GGNNVSSTAA RTAMMPHPSN GPVAPNPIRG MRQTTSSDGQ LPFTLEMLPD 600 GPAGFEFSGF GSSMAMGGLM NHHVHHQQQG MDNTFLKAKE EAREDLFLES LLC

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MQGRPMEKHR LREKLQSGSL DTSANSHPPP NCTASFTFPA HGHGHHPFFM TTSSFSSLLT  60
SSSRDDIIDH HHHHHRVGGS NNNSSSSSSL SDRIAERTGS GVPKFKSIPP PSLPLSPPSV  120
SPSSYFAIPP GLSPAELLDS PVLLSASNNI MPSPTTGTIP AHAFNWSWQV APPAGSGGSR  180
PVNRAEDFDK CHPSFFDFTF QTGPNIAAAA VTQGQKQSWN LPESAKQDDD ALRKGLVKPE  240
FDSYTPEEIT ALQTGNNLNN MTISNGTHQS MHSTSNPYNQ QQQQPNRRSD DGYNWRKYGQ  300
KQVKGSENPR SYYKCTYPNC PTKKKVEKSL DGQITEIVYK GSHNHPKPQS TSRRSSSSSS  360
APPTHAVALV QAASSSGHPP ISDFLDHSLS AQMESGTPDN SSLSVGDEDF DQGSQKSKTA  420
GGDDLDEDEP DAKRWKKEGE SEGISGAGSR TVREPRVVVQ TTSDIDILDD GYRWRKYGQK  480
VVKGNPNPRS YYKCTHPGCP VRKHVERASH DLRAVITTYE GKHNHDVPAA RGSSSHTVNR  540
TSTEGTSNNS GGNNVSSTAA RTAMMPHPSN GPVAPNPIRG MRQTTSSDGQ LPFTLEMLPD  600
GPAGFEFSGF GSSMAMGGLM NHHVHHQQQG MDNTFLKAKE EAREDLFLES LLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	3e-84	WRKY family protein