PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66377.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 252aa    MW: 27081.7 Da    PI: 8.2686
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.52.4e-20133167135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  OWM66377.1 133 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 167
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MHRCESSNNM VGPGSCSCGG YHHAQSSPLS VLYPDPYSYP NPYPYSYSLA SGSASVDCTL  60
SLGTPSTRLS EDVDDSSRRS RGSGQERRSS ISNFCWDILQ TTKHGAPSSG SQSNKSAGRG  120
NSSGGDPLLA RRCANCDTTS TPLWRNGPRG PKSLCNACGI RFKKEERRAT AAAASASSMD  180
AQSAMFSHGQ YGSWAAAAAA QPHHQKLPSC LGTEFRFMED EAQNHSDNGI SFLSWRLNVT  240
DRPSGLIHDF TR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-38GATA family protein