PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66298.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 291aa    MW: 33652.5 Da    PI: 9.4393
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3482.3e-1519111199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ffk+l     ++++ l++p  f+++++++   +++++le    g    W+vk+  +k++++++ t+GW++ v++ +L++gDf+vF+l++  e++l v v
  OWM66298.1  19 FFKIL--IGDFTTK-LRVPPAFVKNFKEI--LPTKVRLEYdYVGrpLLWNVKM--KKNKSECYVTGGWQKIVRDLDLRVGDFLVFRLVN--EETLEVVV 108
                 56666..5556665.999*****888766..88899999735556678*****..*******************************987..45568888 PP

                 E-S CS
          B3  97 frk 99 
                 f++
  OWM66298.1 109 FDR 111
                 887 PP
2B337.25.3e-122042731787
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 +lp k a+e ++   ++k   ++ ++gr+W+v +++ +k+ +r  +++GW++F ++n+++ gD+v + ++g 
  OWM66298.1 204 ILPPKVANEAEQ--WTKKSALIKGTDGRKWRVVIKVrTKGYCRLDFSTGWRKFIRDNNVCPGDTVRLVFKGG 273
                 678888866654..455679999***********887888999*********************97665553 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MARRPSKPKK EKIIAQPYFF KILIGDFTTK LRVPPAFVKN FKEILPTKVR LEYDYVGRPL  60
LWNVKMKKNK SECYVTGGWQ KIVRDLDLRV GDFLVFRLVN EETLEVVVFD RTCCEKKINI  120
ETKQDRELGD NRKGKVEEEE EEEEESSESH GGDSDEEEEG RGDDGCAPAS PLSSSNKHYI  180
VHEKRLVKHE MLYYVIPWIN RSSILPPKVA NEAEQWTKKS ALIKGTDGRK WRVVIKVRTK  240
GYCRLDFSTG WRKFIRDNNV CPGDTVRLVF KGGRDNLVEA QVPSRVSRSA N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.13e-13B3 family protein