PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66259.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family M-type_MADS
Protein Properties Length: 226aa    MW: 25872.1 Da    PI: 8.0339
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF60.81.6e-191763147
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                k+ie++  r +tfskRr gi KKA ELS+LC+a++ +++fs+tgk +
  OWM66259.1 17 KKIEDENIRLITFSKRRSGIYKKACELSTLCGAQIGIVVFSPTGKPF 63
                689*****************************************965 PP

Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MDLDGRKTRG KQKIQIKKIE DENIRLITFS KRRSGIYKKA CELSTLCGAQ IGIVVFSPTG  60
KPFSFGQPTI MAVLERYCNR NISKQPLDGD RVQQILEAQR RERIQELNQT LDETLTRLMD  120
EKKRGKSLAQ LIKETRAGKA ARGEVSWWEA KIEELSPPQL EQVSESLEQF YGDLTNHMNQ  180
RNNDNQNNNN NSNIVGSSIS SWETLNFDFN IADFDIGSGG FPDNWW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-34M-type_MADS family protein