PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM66250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 25857.6 Da PI: 6.9176 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.2e-19 | 108 | 156 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ r +r++lg+f tae+Aa+a+++a+ +++g OWM66250.1 108 YRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEQAARAYDRAAIEFRG 156 9*******.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MEESSDVPAD EQEHNIIVSA LKHVLTFGHE GGPSEAQNEP PASVLALPDG AMCQQCWIGG 60 CLGCNYFPQD GTTDRVNVRS DVGRGARARA RQANNGGGGN GRAVKRNYRG VRQRPWGKWA 120 AEIRDPRRAA RVWLGTFETA EQAARAYDRA AIEFRGARAK LNFPDSEAKA RAPGDGVVPN 180 RNGTRQCAQK EASSETVGPE ARGEGEKVGS GDEFWEMFER EELKDWMAIY NKLSSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-30 | ERF family protein |