PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66058.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 245aa    MW: 26099.1 Da    PI: 5.9499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1850100155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +grWv+eIr+p++   + r++lg+f t+e+Aa+a++aa+++l+g
  OWM66058.1  50 PVYHGVRMRA-WGRWVSEIREPRK---KNRIWLGTFATPEMAARAHDAAALALKG 100
                 68*****998.**********854...59***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSSTQSDTAI ASSKSLDMTT SPQPNLQPGT PDQPVKPKRA RRADGGNKHP VYHGVRMRAW  60
GRWVSEIREP RKKNRIWLGT FATPEMAARA HDAAALALKG RSAVLNFPEL AASLPKLAST  120
APHHIQAAAA KAASIDIAPT NPATATTSGS QSSGGSNSWS SEGLVDLSGG GGEAPEIVEL  180
PRLGEIIELP RLGTSFDSFI ESMDQAGSWV YPHWYYNDNE EISSAEECSV ISGGFDAFFG  240
ELLIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-30ERF family protein