PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65989.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 552aa    MW: 60136 Da    PI: 5.7081
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS424.49.1e-1301675321374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                 lv++L++cA+ v+ gd++la++l+ +++ l  + ++g  + ++a yf+ AL++r+++    + +a +p         e+   ++ f+e++P+lkf+h+t
  OWM65989.1 167 LVHALMTCADSVQRGDFQLARTLIDQMNALltRVNTGCGIGKVAGYFVDALSRRILG----VGSAHAP-------AHENEILYHHFYEACPYLKFAHFT 254
                 689**************************987888899*******************....3333333.......3344567789************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aNqaIlea+eg+++vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++v+f f+ ++a+rled+++++L+v
  OWM65989.1 255 ANQAILEAFEGHDCVHVIDFSLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDTLREIGLRLAELAQSVNVRFAFRGVAASRLEDVKPWMLQV 353
                 *************************************************************************************************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  ++Ea+a+n+++qlh+ll  +++ +s   ++++vL+ +++ +Pk++++veqea+hn+  Fl+rf+eal+yys++fdslea  p   + ++ + +++l+r
  OWM65989.1 354 GSNEAVAINSIMQLHKLLGPDLARNSqnsPIEAVLSWIQGFNPKIMTLVEQEANHNQLGFLDRFTEALYYYSTMFDSLEAACPI--QPDKALAEMYLQR 450
                 ******************88877666555899*************************************************865..4566778899*** PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ei+n+v+cega+r+erhe l +Wr+rl++aGF+p++l+++a kqa++ll  ++ +gy+vee +g+l+lgW++rpL+++SaW+
  OWM65989.1 451 EICNIVCCEGAARVERHEPLTQWRDRLGQAGFRPLHLGSNAFKQASMLLTLFSAEGYNVEETEGCLTLGWHSRPLIAASAWQ 532
                 *********************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MGPFDTAATS GSSSSSAGAG KPPPPPPPPH LQTELDGLLV GAGYKVRNSD LRHVAQRLER  60
LESAMVSSPS HVSHLASDAV HYNPADLVSW VDSLLSELSH HPSSSSSCSS SRSLPGPSSD  120
LPDLDDLIAS PGATAPWLHP EMPRQHEPQQ QLMTVVTAME EDSGIRLVHA LMTCADSVQR  180
GDFQLARTLI DQMNALLTRV NTGCGIGKVA GYFVDALSRR ILGVGSAHAP AHENEILYHH  240
FYEACPYLKF AHFTANQAIL EAFEGHDCVH VIDFSLMHGL QWPALIQALA LRPGGPPLLR  300
LTGIGPPSPD GRDTLREIGL RLAELAQSVN VRFAFRGVAA SRLEDVKPWM LQVGSNEAVA  360
INSIMQLHKL LGPDLARNSQ NSPIEAVLSW IQGFNPKIMT LVEQEANHNQ LGFLDRFTEA  420
LYYYSTMFDS LEAACPIQPD KALAEMYLQR EICNIVCCEG AARVERHEPL TQWRDRLGQA  480
GFRPLHLGSN AFKQASMLLT LFSAEGYNVE ETEGCLTLGW HSRPLIAASA WQASPAIVGP  540
EMEANNDRNN ND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-126GRAS family protein