PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65094.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 334aa MW: 37658.6 Da PI: 8.7835

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.2	3.4e-12	29	82	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G +W++Ia+++ ++ +k+c++rw++ OWM65094.1 29 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLEgrsgkymQHTDRKSCRLRWFNQ 82 899*****************************6666666666678999999985 PP
2	Myb_DNA-binding	61.1	2.4e-19	89	133	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T eE+e+l+ a++ +G++ W++Iar+++ gRt++ +k++w+ + OWM65094.1 89 RRPFTDEEEERLLSAHHIHGNK-WALIARMFP-GRTDNAVKNHWHVV 133 679*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MIMDEQSSGP ASNFSGSGDE AKGGSCCSRG HWRPAEDEKL RQLVEQYGAQ NWNSIAEKLE 60 GRSGKYMQHT DRKSCRLRWF NQLDPRINRR PFTDEEEERL LSAHHIHGNK WALIARMFPG 120 RTDNAVKNHW HVVMARKQRE QSKIRGKRVR PPFPDQTICS DPNGVAQFRG RKPGLDQESI 180 SSSFELFDFQ NPNKDGTFAL SPPSSLSWSF TFGPASSSTY SHKDRILKRS GGNYIKCYSQ 240 SSKGLSQSVH QPFYSSSSSS SSFFANNKYI NRDHDQMVSF CDQHDDDDSS AKLFKLMRSS 300 SAASREHVQG DDSGGQSKHD EVPFIDFLGV GISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	8e-64	MYB family protein