PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM64862.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24232.8 Da PI: 4.6801 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.8e-19 | 121 | 171 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ ng +r +lg++ t+e+Aa a+++a+ k++g OWM64862.1 121 QYRGVRRRP-WGKYAAEIRDPKRNG--ARRWLGTYETPEDAALAYDRAAFKMRG 171 59*******.**********98776..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 219 aa Download sequence |
MNKESLVSDS EFALLESIRH YLLSDDLETN WGTIPRFFED ELCGESPSIT NNLLPSDDSV 60 SSLASNEEEN GGSFGAVGDD IVVDFPLVDP SSPDDCQAGA DCAAVANDQA NYYVPVPRVM 120 QYRGVRRRPW GKYAAEIRDP KRNGARRWLG TYETPEDAAL AYDRAAFKMR GSKARLNFPH 180 LIGGDGVEPV RVKPKHRRVF KNPSGSDCSQ SQPEDRMGC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-45 | ERF family protein |