PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM64860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24509.1 Da PI: 4.7633 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 120 | 171 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrdp+ ng +r +lg++ t+e+Aa a+++a+ k++g OWM64860.1 120 TQYRGVRRRP-WGKYAAEIRDPKRNG--ARRWLGTYETPEDAALAYDRAAFKMRG 171 58********.**********98776..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MHKESLMSDS EFALLESIRH YLFSDDHDTN WGTIPEFFKD ELCWESPSIA NNHFPSDDSI 60 SSPASNEEEN GGSFGAVGDD IIVDFPLVDS SSPDDCQAGA DCVAMVNDQV NYYVPVPRAT 120 QYRGVRRRPW GKYAAEIRDP KRNGARRWLG TYETPEDAAL AYDRAAFKMR GSKARLNFPH 180 LIGCDGVEPV RVNPKRRRVF KNPSGNDCSQ APPEDLMGC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 195 | 199 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 7e-44 | ERF family protein |