PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64788.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 319aa    MW: 35154.7 Da    PI: 4.8936
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86e-112452851055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  OWM64788.1 245 RKRRERINERLKILQSLVPNG-----TKVDISTMLEEAVHYVKFLQ 285
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEPMDPVSEG EWSSLCGIGS NEEAHFMAQL LGNGPLNFEP GCGLGFGSWP AHESTVSFLG  60
SNDSSFYPSN NFPHTSPIYS SSSGDNNDYL NLGETTNPIL ESENGAVLID SGPIGEHDFP  120
RHDIVHLKGQ EEEADMKKNS SLESSRKQSR STRNKMKRNV KLKKSQSLEF SSQNEEDDNT  180
NNDNKNAPVY WQSSSPCCSE DDSSISQGEN GGSGSSVKEP GALNQGWKTR ASRGSATDPQ  240
SLYARKRRER INERLKILQS LVPNGTKVDI STMLEEAVHY VKFLQLQIKL LSSDDLWMYA  300
PIAYNGIDIG LNLKINTPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-57bHLH family protein