PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64392.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 355aa MW: 38542.6 Da PI: 6.3188

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.4e-10	268	311	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++RR+ri +++ L+el+P+ +K++ +++LekA+ Y+k Lq OWM64392.1 268 IAAKNRRERISERLKILQELVPNG-----PKVDLVTMLEKAISYVKFLQ 311 5679*****************5.....4****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MPRELISSGL LQAAGASSSY YHDSFDNNGG GEAGGGSSSQ QALSDLSSSH SQGSFGYDHE 60 YHKPPLSLDE EDNLEKKKTT NIVVMDNIND SNINNFLHRG ILINRSDIGF RADSVINFKN 120 GSSGSASFMN GTESLLSFEQ SHQMRTNHQK DTINDDSFIW KDDPNNIPSC YGADSKGSPS 180 SRLLDELNNC SYHQPGSSSY GWLYSDAAVI AADRIQETGT QGSALLKRPY MGDESAPAAQ 240 PSKKPCTNAA KSSSSKPKPA SSKDPQSIAA KNRRERISER LKILQELVPN GPKVDLVTML 300 EKAISYVKFL QLQVKVLATD EFWPAQGGKA PDISQVKEAI DAILASQRER TSSSK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MPRELISSGL LQAAGASSSY YHDSFDNNGG GEAGGGSSSQ QALSDLSSSH SQGSFGYDHE  60
YHKPPLSLDE EDNLEKKKTT NIVVMDNIND SNINNFLHRG ILINRSDIGF RADSVINFKN  120
GSSGSASFMN GTESLLSFEQ SHQMRTNHQK DTINDDSFIW KDDPNNIPSC YGADSKGSPS  180
SRLLDELNNC SYHQPGSSSY GWLYSDAAVI AADRIQETGT QGSALLKRPY MGDESAPAAQ  240
PSKKPCTNAA KSSSSKPKPA SSKDPQSIAA KNRRERISER LKILQELVPN GPKVDLVTML  300
EKAISYVKFL QLQVKVLATD EFWPAQGGKA PDISQVKEAI DAILASQRER TSSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66470.1	1e-56	bHLH family protein