PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM64230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33131.6 Da PI: 6.0619 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.3 | 4.1e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde+lv+++++ G g+W++ ++ g+ R++k+c++rw +yl OWM64230.1 14 RGPWTPEEDEILVQYITKNGHGNWSSLPQLAGLLRCGKSCRLRWTNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.4e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia ++ gRt++++k+ w+++l OWM64230.1 67 RGPFTPEEEKLVIQLHGILGNR-WASIAGQLP-GRTDNEIKNLWNTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MGRKPCCVNK ELKRGPWTPE EDEILVQYIT KNGHGNWSSL PQLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TPEEEKLVIQ LHGILGNRWA SIAGQLPGRT DNEIKNLWNT HLKKRLLLMG 120 LDPQTHEPFP LGGVGPKKSP ATPATRHMAQ WESARLEAEA RLSRESLLVN PPPMVKSDSD 180 FFLLLWNSEV GDSFRRINVE EKTPPSQSPI SQASSSAKGK PALASSSRTE NDRLEDMEFG 240 SCKSYLELMA GSDSSCSSEL EDASDTALQL LLDFPINNDM SFLEESTDPY GMCTSML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-121 | MYB family protein |