PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63874.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 588aa    MW: 68845.4 Da    PI: 8.6543
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.33.4e-08382422346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +WT+eE el++++++++G++ W+t a  m   + + ++k+ w+ 
       OWM63874.1 382 SWTQEEYELIKKYHEEHGSD-WRTLADAMS--KHRIHVKDTWRR 422
                      7*******************.********8..566778887775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    
MGKKSEERKR KKHGITDQDR GACPAENSDA NRGEDVVELS GHERKKRKRK HEKSSIDNGL  60
DSAGNASENG KGAVDDESKS ERRKKRKMEL NADREAELER PRKEKKKIRK ETEARAEPDV  120
DPLKLEDSQN EATTERYEKE TSAHEDNGYV RSGLEGVKSK KKKKKHKQNL GDSDWVGVGE  180
GQVIMKKGKK KKEESKHGVD EDTTNQLDSG IGNNKKEEEE KRKKKKKEKQ EEEEEEEEKK  240
KKEKKEKQKE EKEKKNKKKK EEEKGKKDKL VKGSSRKVRF ADEVEIFPSL DSPSEGNVKE  300
KDQLVRGKRF SPEEDELVKK AVYKYIEDHG LGENGLDMIL RCKGHAETRH CWKEIGAALP  360
WRPFTSVYYR AHILFERSET RSWTQEEYEL IKKYHEEHGS DWRTLADAMS KHRIHVKDTW  420
RRIKLLNKKN GQWTQEEYQS LFELVNKDLQ MKAMEEKVWK HGMLKDNICW EAISQKLSTR  480
TNATCCQKWY DQLTSPMVAE KIWADADDYR LLDALVALDA CSMEDVDWDC LIENRSGEVC  540
RRRWVQMVRH IGEYQTESFA EQVEILSKRY CPDLLEAREA CDKKRLED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1812RKRKK
2848RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
3949RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
44449RKKRKR
54450RKKRKRK
64484RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
74550KKRKRK
84585RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
94686RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
104787RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
1184110KKRKMELNADREAELERPRKEKKKIRK
12102110RKEKKKIRK
13160189KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
14160200RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
15161190KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
16162191KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
17186226RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
18189229RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
19221250KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
20221247KKRKMELNADREAELERPRKEKKKIRK
21221241KRKKKKKEKQEEEEEEEEKKK
22221242KRKKKKKEKQEEEEEEEEKKKK
23221227RKKRKRK
24221261RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
25222251KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
26222242KRKKKKKEKQEEEEEEEEKKK
27222243KRKKKKKEKQEEEEEEEEKKKK
28222228RKKKKKE
29222229RKKKKKEK
30222262RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
31223252KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
32223249KKRKMELNADREAELERPRKEKKKIRK
33223243KRKKKKKEKQEEEEEEEEKKK
34223244KRKKKKKEKQEEEEEEEEKKKK
35223263RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
36224253KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
37224250KKRKMELNADREAELERPRKEKKKIRK
38224245KRKKKKKEKQEEEEEEEEKKKK
39224264RKRKKHGITDQDRGACPAENSDANRGEDVVELSGHERKKRK
40225246KRKKKKKEKQEEEEEEEEKKKK
41239268KKKKKKHKQNLGDSDWVGVGEGQVIMKKGK
42239265KKRKMELNADREAELERPRKEKKKIRK
43239260KRKKKKKEKQEEEEEEEEKKKK
44240261KRKKKKKEKQEEEEEEEEKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-119MYB_related family protein