PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63204.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 246aa    MW: 27969.8 Da    PI: 9.6273
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-0890135555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h + Er RR++ +++f+ L +llP       +K++K +i++ A   I++Lq
  OWM63204.1  90 HMMSERMRREKQKQSFSALHSLLPRG-----TKNDKKSIVQAALTKIQDLQ 135
                 7899********************97.....8*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDVFFQEDHE LFVSSSSNSS LFWSDDIPPA HFPSWSSFMP YRAVGTSSNQ SRASLGLSAN  60
MNKRVLEFVR RSWPECSRNR ELDRGKGYQH MMSERMRREK QKQSFSALHS LLPRGTKNDK  120
KSIVQAALTK IQDLQGYKEE LQKRNDDLKA SLGVMAVKEN DAPRGTKIKV RIGNPVSGMD  180
SMLEVLRCLD DLGLETTSAR SKFSAQEFSA VLETREKVEA AEVENVIQSK LYEAERKLLH  240
KLHGIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-38bHLH family protein