PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM63194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | C2H2 | ||||||||
Protein Properties | Length: 214aa MW: 23105.6 Da PI: 4.844 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15 | 7e-05 | 42 | 64 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +C++ F++ L H++ H OWM63194.1 42 YECVYCKRGFTNAQALGGHMNIH 64 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MYMAESENPG GSDSSSGQKD QNHGKGEDMI VKEAEATGKR SYECVYCKRG FTNAQALGGH 60 MNIHRKDRAN KSFLSSSSPP KNIPAVSILT CFISPSNIIP DAPVASASPS IGLIPSELEK 120 FESRPSLEAL WSKLSSHSST ACPSLVSPTN YLESYLQVAM SSTSSSRGID HEEALGSNLS 180 LQVGSPDHVE DTDEKGDDRM EEIDLELRLG RRDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43540.1 | 8e-16 | C2H2 family protein |