PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63065.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 406aa MW: 43230.6 Da PI: 8.2887

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.7	1.2e-09	255	299	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L OWM63065.1 255 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 299 99*********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MANNHTEPPT DDFLEQLFGL PNFPAPEAGL PTGEGPPMAA AAPPPMMLQL SSGDGSGHIA 60 TLGPGGGAGG GYHQPPMFPL GLSLEQGGGG GFLKPEDASG RGKRFRDEVV DGRASTVKNY 120 ANSFLEVVQS LLRPWQSPSR PPLLFIEIKG RQSLDRGLTC LNCGCQASIK GVVILNQAPA 180 YLGRICRALA LAIAAGCSML LGERAVLKLL DKLSRCFSAA VFHGQPVSTT VPAAPHPPAM 240 RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQELVPSV NKTDRAAMLD EIVDYVKFLR 300 LQVKVLSMSR LGGAGAVAPL VTDIPLASVE EEGGEGGRNQ PAWEKWSNDG TERQVAKLME 360 ENVGAAMQFL QSKALCIMPI SLATAIYHSQ PPDTSSLVKS ESNPTS

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MANNHTEPPT DDFLEQLFGL PNFPAPEAGL PTGEGPPMAA AAPPPMMLQL SSGDGSGHIA  60
TLGPGGGAGG GYHQPPMFPL GLSLEQGGGG GFLKPEDASG RGKRFRDEVV DGRASTVKNY  120
ANSFLEVVQS LLRPWQSPSR PPLLFIEIKG RQSLDRGLTC LNCGCQASIK GVVILNQAPA  180
YLGRICRALA LAIAAGCSML LGERAVLKLL DKLSRCFSAA VFHGQPVSTT VPAAPHPPAM  240
RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQELVPSV NKTDRAAMLD EIVDYVKFLR  300
LQVKVLSMSR LGGAGAVAPL VTDIPLASVE EEGGEGGRNQ PAWEKWSNDG TERQVAKLME  360
ENVGAAMQFL QSKALCIMPI SLATAIYHSQ PPDTSSLVKS ESNPTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	260	265	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.3	6e-80	bHLH family protein