PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62853.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 259aa    MW: 28992 Da    PI: 6.4048
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.19.7e-3052110259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC++a gC++kk+ver+++d +v+++tY+ +Hnh+
  OWM62853.1  52 SDSWSWRKYGQKPIKGSPYPRGYYRCSTAkGCSAKKQVERCKSDASVLVVTYTTSHNHP 110
                 69************************9998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEASLSTTMN EDAAAADELK PQTPPAKKRK VVEKTVVRVR IGNREKNEGP PSDSWSWRKY  60
GQKPIKGSPY PRGYYRCSTA KGCSAKKQVE RCKSDASVLV VTYTTSHNHP ERLGCNPRKP  120
KQAGQQLQKS PSGREPEESS SQDQEAQQGT YRPAMEAEEF HYSQYLQEGG GELFTLCQLD  180
TTGNNVSSGL VLLEEESGHV RVPSSTDSLT ATTLGPARSE LEEDEYYGFF DELEELYPTV  240
SLFSREGYHG RHHQQQLVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.14e-32WRKY family protein