PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62841.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 326aa    MW: 36630.9 Da    PI: 5.628
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.85.3e-34155212259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers+ dp++v++tYeg+H h+
  OWM62841.1 155 EDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSHADPSIVVTTYEGQHIHP 212
                 8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEMENLVKSS AAQSQYGFME LLGMQDLTPF SYYHDNYLLD DMLLLHNKAT PKPPAGVEYS  60
SLEAANQPAT PNTSSISSAS TDEVQVKAAE EDEEDEDGTK QHGAEEPEEE EEEEEEQEEK  120
KTKKKALERN KKAKEKKQRE PRFAFMTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC  180
TSASCNVKKR VERSHADPSI VVTTYEGQHI HPSPLLVPRH SALMRPAPEY SAFSGRVGNL  240
FSVDPNMIQR RSHHQCGPYY CPPRVTINDL SPVMRSGQSL QGSTTAAIIE KRGFCPPGSS  300
APASLLILDD GLLQDVVPSH VLKEEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.14e-43WRKY family protein