PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM62736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | FAR1 | ||||||||
Protein Properties | Length: 236aa MW: 26245 Da PI: 8.4983 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.3 | 3.9e-21 | 95 | 193 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 kfY eYA+++GF vr+ ++s+++g++ + ++ C+keg++++ ++ ++k+r++ a+ r gC+a + vk+e+ + w+v+++++eH H+l OWM62736.1 95 KFYTEYARRAGFAVRVLDRQRSSTDGRTLSLRLGCNKEGFKRPGRRGsdgvENKKRNRGASFREGCNAAILVKRERaekrgVEMWMVARFVKEHCHPLL 193 6*****************************************99888899999999999**************99865444567*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MHHQVVPELI AEISGTGTVS AVRLRSRSLD AIKFLPRLNA ESKCLSFDWP SLVSVDLNEE 60 AMETVAEEQK IEPGEGDVWE PCVGMVFESE DAARKFYTEY ARRAGFAVRV LDRQRSSTDG 120 RTLSLRLGCN KEGFKRPGRR GSDGVENKKR NRGASFREGC NAAILVKRER AEKRGVEMWM 180 VARFVKEHCH PLLASTNGFS TTPVVSFVSM PLISVSSCLL LDFGNCLSAA FILRNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.2 | 3e-30 | FAR1 family protein |