PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g993560.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1019aa MW: 111750 Da PI: 8.9917

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g993560.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.5	2e-10	349	400	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 +W t+E++ll++av+++G+ +W+++a ++ +t+ ck ++++++ Pd.00g993560.m01 349 SWGTWEELLLACAVHRFGTQSWDAVATELRkrssnlHLLTPHACKRKFHDLR 400 7*****************************9999997799999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1019 aa Download sequence
MKASVKFRED QKPLLRAKVP LSILGLPFQS GIVAGESKEL TLNLGTFFES GPSIRVGYRP 60 NDTSNPFSLV VKTGTGPFGS PISSSMLMSA EFNLLGSGKN PSFMLHFKPQ FGDFSIKKSQ 120 SSVFQKIVGP DDGVVSAETP AVDTAFMGKK ITVLPSENQA AGILAGVFSG MEMAARTSMP 180 VRNRGVVNLR WGVRVPGEMK SIGANPSAGI AFQKIPFLVM NKIGIEHVDV ADSKGKTTKA 240 AEVEKGLTFP GNAEVAEACF TVKRQLEALQ SENGLLRKAV EDLRQEIAGA TKSISNSGNI 300 GGRNSGGKVD WRSNSEKMSS EEESCDNGLS DYMIFLMDKP NFPEKQTPSW GTWEELLLAC 360 AVHRFGTQSW DAVATELRKR SSNLHLLTPH ACKRKFHDLR RRFSQNDSAS GKDDDTPLTP 420 WLDQLRQRRL DELRRELQRY DHSIVSLQLK VERLTEVREQ SLRETEKLVE KSDLEKTGEE 480 EIEHKDAEPE DSSPEKKGSS GEVSEHDDRS CNESNTTDPK HEIPETEVAD ADKGSGQTEP 540 AGEEIEPAEK LDNPVVEDSC NGSSDSVVKE TAVVEAEKGN SGELKESVAE SKGREEEEGT 600 KVSPSNSEVQ SSASLSRKLG QEPKPGGPGG PDRPEEPSEP DQEDESPAMR GVPVESQPLV 660 EFLGILRSHK FASFFERRLH SQETPIYKNM IRQHVDFELV QTRLEGGRYE PCSRFLFFRD 720 LLLICNNAIV FFGKKSPEYK AACELQLLVS KEMVLQAPKQ DPPPKEETPK LPAPPLNQDP 780 ETSDSLLAKS KLSLPLNACR KRSSITARAS TTSSSGPDRK KEQITTSFRD VKPAVSWKQK 840 EESSDEVEKL HVTKKRRKER LRSSSRNNSS KNGRSRGNTN NDRNSEANDG FSSRVVTSNE 900 NSESKAETEK KSNTNSSGKK RSAADFLSRM KRSSTSKTGL SAETSKTPDN NSKGGRAEQR 960 KNGNGKGNAQ KDQGSRRGSG GRQAAKEQGS PTKRSVGRPS KRAAAPATAG PAKRTRQRG

Sequence ? help Back to Top

Protein Sequence Length: 1019 aa Download sequence

MKASVKFRED QKPLLRAKVP LSILGLPFQS GIVAGESKEL TLNLGTFFES GPSIRVGYRP  60
NDTSNPFSLV VKTGTGPFGS PISSSMLMSA EFNLLGSGKN PSFMLHFKPQ FGDFSIKKSQ  120
SSVFQKIVGP DDGVVSAETP AVDTAFMGKK ITVLPSENQA AGILAGVFSG MEMAARTSMP  180
VRNRGVVNLR WGVRVPGEMK SIGANPSAGI AFQKIPFLVM NKIGIEHVDV ADSKGKTTKA  240
AEVEKGLTFP GNAEVAEACF TVKRQLEALQ SENGLLRKAV EDLRQEIAGA TKSISNSGNI  300
GGRNSGGKVD WRSNSEKMSS EEESCDNGLS DYMIFLMDKP NFPEKQTPSW GTWEELLLAC  360
AVHRFGTQSW DAVATELRKR SSNLHLLTPH ACKRKFHDLR RRFSQNDSAS GKDDDTPLTP  420
WLDQLRQRRL DELRRELQRY DHSIVSLQLK VERLTEVREQ SLRETEKLVE KSDLEKTGEE  480
EIEHKDAEPE DSSPEKKGSS GEVSEHDDRS CNESNTTDPK HEIPETEVAD ADKGSGQTEP  540
AGEEIEPAEK LDNPVVEDSC NGSSDSVVKE TAVVEAEKGN SGELKESVAE SKGREEEEGT  600
KVSPSNSEVQ SSASLSRKLG QEPKPGGPGG PDRPEEPSEP DQEDESPAMR GVPVESQPLV  660
EFLGILRSHK FASFFERRLH SQETPIYKNM IRQHVDFELV QTRLEGGRYE PCSRFLFFRD  720
LLLICNNAIV FFGKKSPEYK AACELQLLVS KEMVLQAPKQ DPPPKEETPK LPAPPLNQDP  780
ETSDSLLAKS KLSLPLNACR KRSSITARAS TTSSSGPDRK KEQITTSFRD VKPAVSWKQK  840
EESSDEVEKL HVTKKRRKER LRSSSRNNSS KNGRSRGNTN NDRNSEANDG FSSRVVTSNE  900
NSESKAETEK KSNTNSSGKK RSAADFLSRM KRSSTSKTGL SAETSKTPDN NSKGGRAEQR  960
KNGNGKGNAQ KDQGSRRGSG GRQAAKEQGS PTKRSVGRPS KRAAAPATAG PAKRTRQRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	854	858	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	1e-70	MYB_related family protein