PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g989530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 334aa MW: 37721.7 Da PI: 6.0717 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 74.5 | 8.6e-24 | 97 | 140 | 8 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 8 nrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rqvtfskRr g++KKA ELSvLC+ evav+ifs tgkl++yss Pd.00g989530.m01 97 ARQVTFSKRRRGLFKKAAELSVLCESEVAVVIFSATGKLFDYSS 140 69****************************************96 PP | |||||||
2 | K-box | 45.3 | 3.8e-16 | 165 | 251 | 12 | 98 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + + ++++ kL ke+e+ r++R+++G+d+e L+l eL +Leq +e sl ++ ++K+el++++i el +k el e+n++Lr+ + Pd.00g989530.m01 165 IELQLENENHIKLSKELEEKSRQLRQMKGQDIEGLNLDELLKLEQLVEASLGRVMETKEELIKTEIMELERKGAELVEANNQLRQTV 251 45566678889*************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MPHFLTSHIN GGDCIHQRQE HLSPSTCSLT LFPQKIIEEY IFPYKGKFIN HFISFLEQQP 60 DSSSSHFSVS FRTQTPKPPT KMMRNKIKIK KIDYLPARQV TFSKRRRGLF KKAAELSVLC 120 ESEVAVVIFS ATGKLFDYSS SSTKDVIERY NADMNGVEKS NNQVIELQLE NENHIKLSKE 180 LEEKSRQLRQ MKGQDIEGLN LDELLKLEQL VEASLGRVME TKEELIKTEI MELERKGAEL 240 VEANNQLRQT VSNYHNHMLI LSGGNTGPAL MDQERLNNNI EGGGEEEGMS AESAISTTCN 300 SAVSLSLEDD SSDEVTLSLK LGKLQLRNPN TERG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 7e-46 | MIKC_MADS family protein |