PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g989430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 621aa MW: 65943.1 Da PI: 8.0033

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g989430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.6e-08	204	248	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed l+ av++ G g+W+ I r g Rt+ q+ rw Pd.00g989430.m01 204 RKKWSEAEDFELIAAVQKCGEGNWANILRadFKG-DRTAGQLSQRW 248 789************************8721344.78888887777 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MVEKTKDPKK CSITEEDTAT LLQRYTATTV LALLQEVAHW PEAKIDWIRL VAKTSTGISN 60 AREYQMLWRH LAYREALVDK FDNGSQPLDD DSDLEYELEA FPAVCGAASA CVKVLIASGL 120 PSDSSHRNGT TVEAPLTINI PNGQPSRTHE NSEPTCSMQG KNITVPVSVK KQPLPAATTS 180 SVATADGGDA NGSASNSMAS RKKRKKWSEA EDFELIAAVQ KCGEGNWANI LRADFKGDRT 240 AGQLSQRWAI IKKRNQELNL RGNSSGKLSE AQLAARHSLS VALNMPNLTA KTIGTAGTNA 300 HNKFARKVAT SNSVLTTGAK AEPQSQQDLK PTKKPYQMEL LGSTTKSRVT SKNTLTKPNC 360 NDDDKVRAIA VAAGARIASP SDAASLLKAA QAKNAVHIMP TGGSSIQSSL PGGMSTHSEP 420 HPNLHMRTGL AGITLSTPPP TDVTPSAVHP GSSKALPLMS QHTPTNGTLL SKQIKGVSCS 480 LDAKLPSKQE VRTEVGSVIA ELGCTPVVLA QDEAVISRNG QDEQVKDDKV DSPNQKAELK 540 ILSSNAENPV SSLNIERDET HHKAVISVQG GGDPSAVDSS EKPSATEKQT DLLGTVIDGC 600 NGKHVLSKEE AGIKINGEHE G

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MVEKTKDPKK CSITEEDTAT LLQRYTATTV LALLQEVAHW PEAKIDWIRL VAKTSTGISN  60
AREYQMLWRH LAYREALVDK FDNGSQPLDD DSDLEYELEA FPAVCGAASA CVKVLIASGL  120
PSDSSHRNGT TVEAPLTINI PNGQPSRTHE NSEPTCSMQG KNITVPVSVK KQPLPAATTS  180
SVATADGGDA NGSASNSMAS RKKRKKWSEA EDFELIAAVQ KCGEGNWANI LRADFKGDRT  240
AGQLSQRWAI IKKRNQELNL RGNSSGKLSE AQLAARHSLS VALNMPNLTA KTIGTAGTNA  300
HNKFARKVAT SNSVLTTGAK AEPQSQQDLK PTKKPYQMEL LGSTTKSRVT SKNTLTKPNC  360
NDDDKVRAIA VAAGARIASP SDAASLLKAA QAKNAVHIMP TGGSSIQSSL PGGMSTHSEP  420
HPNLHMRTGL AGITLSTPPP TDVTPSAVHP GSSKALPLMS QHTPTNGTLL SKQIKGVSCS  480
LDAKLPSKQE VRTEVGSVIA ELGCTPVVLA QDEAVISRNG QDEQVKDDKV DSPNQKAELK  540
ILSSNAENPV SSLNIERDET HHKAVISVQG GGDPSAVDSS EKPSATEKQT DLLGTVIDGC  600
NGKHVLSKEE AGIKINGEHE G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	206	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.2	2e-72	MYB_related family protein