PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g989420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 619aa MW: 65626.8 Da PI: 6.0402 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.8 | 2.8e-09 | 208 | 253 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 r++W++ Ed+ l+ +v+++G g+W+ I r Rt++q+ rw Pd.00g989420.m01 208 RKKWSEAEDLELIAGVRRYGEGNWANILRGDFkGERTANQLSQRWK 253 789************************98522359**********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 619 aa Download sequence |
MVEKPKDPEK SYITEEDTVN LLHRYKAANV LQLLQEVAHS QDVKIDWNQL AEKTSTGISN 60 AREYQMLWRH LAYSEAFVDN FDNGAQPVDD DSDLEHELEA FPAVSGEDST EAAACVKVLM 120 ASGLPSDSTH RSGATVEAPL TINIPNGQPS RTHQNSQPPC SMQGMNITVP VSVQKQPLLA 180 MTTSTGATAE GGDANGSASN NMAPRKKRKK WSEAEDLELI AGVRRYGEGN WANILRGDFK 240 GERTANQLSQ RWKYIRKHHH QDLNVGGNSS NKLSEAQLAT RHAMSLALNM PSITANTIGT 300 AGTNTHSKFG GTNATTNSVP STAAEEELQS QQGLKPAKPY QMGLLGSTSK SQLTSKKTLT 360 KPNSNTDGMV RATAVAAGAR IASPSDAASL LKAAQAKNAV HVLPTGGSSI QSSLPGSMRT 420 HPEPHPNLHY MHTGLAAPPV STPLSTAVTP SATHPGSLKA LPQTSQHAPT NSTLLSKQIK 480 DVSCSLDSEP GCTPTQQVQD GAVISENGQN EGGQKDKVDS PDQKAELKNL STSAENLVGS 540 LDIKGDEADN IAGIGVQSEE RQSAKDNETL CSLKGDDPFA ADSCENLSAS EQQIGLVSIV 600 GDGCNGKQVL GKEETGIKI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 210 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.1 | 3e-86 | MYB_related family protein |