PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g986970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 138aa MW: 15986.6 Da PI: 4.3023 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66.2 | 9.4e-21 | 8 | 84 | 1 | 76 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya..tgkrknr 76 lppGfrF+Ptdeelvv++L++k++ +++ +vi+++++y ++Pw+L+ k+ +e ++wyf+s+r ++ +g+ ++r Pd.00g986970.m01 8 LPPGFRFDPTDEELVVHFLQRKAALLPFHP-DVIPDLHLYPYDPWELDGKALGEGNKWYFYSRRTQNRVtsNGSSSKR 84 79*************************999.99**************977778899*******988766223444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MGDDQFKLPP GFRFDPTDEE LVVHFLQRKA ALLPFHPDVI PDLHLYPYDP WELDGKALGE 60 GNKWYFYSRR TQNRVTSNGS SSKRRGHLKT VNNQFSGYVL CRVYERDEDD DDDDGTELSC 120 LDEVFLSLDD LDEISLPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 7e-51 | NAC family protein |