PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g985610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 374aa MW: 42972.8 Da PI: 6.5511

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g985610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H Pd.00g985610.m01 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	16.5	2.4e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H Pd.00g985610.m01 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	21.3	7.3e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk Fs nL++H++tH Pd.00g985610.m01 136 YRCNfeGCGKAFSLDFNLRSHMKTH 160 99**********************9 PP
4	zf-C2H2	17.5	1.1e-05	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi++H Pd.00g985610.m01 166 HICPypDCGKRYAHEYKLKNHISSH 190 679999******************6 PP
5	zf-C2H2	13.8	0.00017	230	255	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H Pd.00g985610.m01 230 YACPyeGCEKAYIHEYKLKLHLRReH 255 89**********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
METQFHHNYF ERRPIFRSKT PAVKWFKEWV PQDVVATGGK CSLLKWVTAD TIKALKEKSK 60 ETVAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDYRCNF EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHISSH HEKSVMVDVP KYATPPAEKQ IKTPKPPAGG YGSASSDRPY ACPYEGCEKA 240 YIHEYKLKLH LRREHPGHMS DENAENAPNN ADNEMDEASD QDAYAGKRVN GKSQKQNRPK 300 PNLKFPPAKV VQRKGATPSP ATMNTMKKPW PVKDEVVYEE EDSEETEEDR DNVEDGWRYG 360 ENNDDDDEET EDED

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

METQFHHNYF ERRPIFRSKT PAVKWFKEWV PQDVVATGGK CSLLKWVTAD TIKALKEKSK  60
ETVAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS  120
SKLKRHFLIH TGERDYRCNF EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE  180
YKLKNHISSH HEKSVMVDVP KYATPPAEKQ IKTPKPPAGG YGSASSDRPY ACPYEGCEKA  240
YIHEYKLKLH LRREHPGHMS DENAENAPNN ADNEMDEASD QDAYAGKRVN GKSQKQNRPK  300
PNLKFPPAKV VQRKGATPSP ATMNTMKKPW PVKDEVVYEE EDSEETEEDR DNVEDGWRYG  360
ENNDDDDEET EDED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-151	C2H2 family protein