PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g982360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 237aa    MW: 26251.1 Da    PI: 8.815
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g982360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.2e-20112146135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  Pd.00g982360.m01 112 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 146
                       ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGTWPVHVHA VSSTTPNPIP PSPCSSPCPT ITSRTPSTRL TENDVVLDDK RTRNERRSVS  60
NFCWDLLQPK HHATSATSSH HHKNGSHRSG GNGNGVSNAV HSNNDPLLAR RCANCDTTST  120
PLWRNGPRGP KSLCNACGIR FKKEERRATA AAANVASSSV VGMEHNSHML SQHHHNNSWM  180
PHSQTQKMQC FSPAMGNEFR FMEDDTAHHE NDATGIPFLS WRLNVTDRPS LVHDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.19e-41GATA family protein