PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g969200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 371aa MW: 40722.4 Da PI: 6.8331

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g969200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+ Ed +l+ +v ++G g+W++++++ g++R++k+c++rw +yl Pd.00g969200.m01 14 RGIWTAAEDAKLLAYVSKHGVGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	47.6	3.8e-15	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E+e ++++++ G++ W++Ia+ ++ gRt++++k++w++ Pd.00g969200.m01 69 SFTPQEEEHIINLHEAIGSR-WSLIAKLLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGRPPCCDKS NVKRGIWTAA EDAKLLAYVS KHGVGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHDSF TPQEEEHIIN LHEAIGSRWS LIAKLLPGRT DNDVKNYWNT KLKKKLSKMG 120 IDPVTHKPFS QILSDYGNIS SLPSINNQFG FFFKNSNNTF VPKSEPSSGI TGLPLGVNTY 180 SNMMMNPIGS DNSTASTLSL GIVAQFQEIN QDCVQVQPHF LNEVASSCSS SSSPHATDHQ 240 LSSQPTYLCQ QSLHEAQITP SSSFNWSEFL LHDPFSSADK LKQEQDFHGT MMSSSSAIPT 300 LAGGSEHNLN ATTQASDFGS SAINIGGQRN NNLAHDQASS SSMTSFVDTI LGQDSEMQAA 360 FPELLDASFY Y

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGRPPCCDKS NVKRGIWTAA EDAKLLAYVS KHGVGNWTLV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDSF TPQEEEHIIN LHEAIGSRWS LIAKLLPGRT DNDVKNYWNT KLKKKLSKMG  120
IDPVTHKPFS QILSDYGNIS SLPSINNQFG FFFKNSNNTF VPKSEPSSGI TGLPLGVNTY  180
SNMMMNPIGS DNSTASTLSL GIVAQFQEIN QDCVQVQPHF LNEVASSCSS SSSPHATDHQ  240
LSSQPTYLCQ QSLHEAQITP SSSFNWSEFL LHDPFSSADK LKQEQDFHGT MMSSSSAIPT  300
LAGGSEHNLN ATTQASDFGS SAINIGGQRN NNLAHDQASS SSMTSFVDTI LGQDSEMQAA  360
FPELLDASFY Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	6e-85	MYB family protein