PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g962330.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 700aa MW: 79127.3 Da PI: 9.9235

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g962330.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.6	4.7e-18	282	368	1	95
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v + +l lp kf+e+h +k ++s +++lede+g++++ + +k+ + l++GW++F+ +++L++gD +vF+l++ +f + Pd.00g962330.m01 282 FVKSMVRSHVYSCFWLGLPSKFCEDHLSK-TGS-EMVLEDEDGNEYDAVY--IGKRAG--LSGGWRGFALEHKLDDGDALVFELTEPARF--K 366 89**********************655.444.9***********..555544..9********************9765555..4 PP EE CS B3 94 vk 95 + Pd.00g962330.m01 367 IY 368 44 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MGKQPVRMKA VVYALSPFQQ KVMPGLWKDL PTKTHHKISE NWISATLLLG PLVGVYSYVQ 60 SYQEKEKLEH RTQIQIRFGF GLHFMVGAEG STSYRSPCLL GCAITEHLNS LWFSDTATFS 120 LDQSDLAFSL LGQSDSKRKM AAAVDSFTAN TYEEARNQRL EENKRKFQDL GISNISKTLT 180 HLTASPNKSQ QRVSRPKAKN TCFDLEPRRS SRQRNPIQSY RDDVDIGLPT LRKGSRKTSS 240 SWGSYLARPI EEVRAASYEE RSAAFKAAEK LQENLQTENP SFVKSMVRSH VYSCFWLGLP 300 SKFCEDHLSK TGSEMVLEDE DGNEYDAVYI GKRAGLSGGW RGFALEHKLD DGDALVFELT 360 EPARFKIYIV KAYPMPSLEC FKNNVDKEEI TSAEKTSKAA MKTDSESNQK RRSKRGIVLE 420 MDEPQTSPDS EPNQKRRSKR GTVPAMVDTK TSPDSESIQK RRSERGVVPV MEDSKTSPVL 480 EPNQRRRSKR GMVPEMEDTK TFPDSEPNQK RRSKRGTVPA MVDTKTSPDS ESIQKRRSER 540 GVVPVMEDSK TSPVLEPNQR RRSKRGMVPV MDDTKTSPDS ESNQKQRSKR GIVPEMDDTK 600 TSPKALPDSP KGQEIEQEVS PMKKNEVAPK QIRKKAKANR VRSTENPEGC EVQEASTGSL 660 EGCEVKQEAS TTETDSRIVE DEKKCVARKP RKERLFRKRA

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MGKQPVRMKA VVYALSPFQQ KVMPGLWKDL PTKTHHKISE NWISATLLLG PLVGVYSYVQ  60
SYQEKEKLEH RTQIQIRFGF GLHFMVGAEG STSYRSPCLL GCAITEHLNS LWFSDTATFS  120
LDQSDLAFSL LGQSDSKRKM AAAVDSFTAN TYEEARNQRL EENKRKFQDL GISNISKTLT  180
HLTASPNKSQ QRVSRPKAKN TCFDLEPRRS SRQRNPIQSY RDDVDIGLPT LRKGSRKTSS  240
SWGSYLARPI EEVRAASYEE RSAAFKAAEK LQENLQTENP SFVKSMVRSH VYSCFWLGLP  300
SKFCEDHLSK TGSEMVLEDE DGNEYDAVYI GKRAGLSGGW RGFALEHKLD DGDALVFELT  360
EPARFKIYIV KAYPMPSLEC FKNNVDKEEI TSAEKTSKAA MKTDSESNQK RRSKRGIVLE  420
MDEPQTSPDS EPNQKRRSKR GTVPAMVDTK TSPDSESIQK RRSERGVVPV MEDSKTSPVL  480
EPNQRRRSKR GMVPEMEDTK TFPDSEPNQK RRSKRGTVPA MVDTKTSPDS ESIQKRRSER  540
GVVPVMEDSK TSPVLEPNQR RRSKRGMVPV MDDTKTSPDS ESNQKQRSKR GIVPEMDDTK  600
TSPKALPDSP KGQEIEQEVS PMKKNEVAPK QIRKKAKANR VRSTENPEGC EVQEASTGSL  660
EGCEVKQEAS TTETDSRIVE DEKKCVARKP RKERLFRKRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	3e-71	B3 family protein